miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio



ABOUT THIS RECORD

ID: MNEST005495
species: Danio rerio
miRNA family: miR-1907
source: miRNEST

Taxonomy by NCBI:
Danio rerio Danio Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAGCAGCAGAGGAGCTGGAGG

miRNA*
TCCAGGCTCCTCTACAGGCTGGA

mismatches: 4
bulges: 2

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pre-miRNA
CGGTGACTCTGATCTGTGAGGTTCCAGGCTCCTCTACAGGCTGGACGTTCAGCTGGTTCAGAGATGCTGATCATCTGTCAGACAGCAGCAGAGGAGCTGG
AGG
CTCTTACACTCTCAGTCCT


dot-bracket secondary structure
.((.((((..((..(((((((((((((.(((((((....((((......(((.((((.(((.....))))))).))).....))))...)))))))))))
)).
.))))))).))..))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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